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Next Generation Sequencing logo
Use data and code generated from the Neurobiology Neurodegeneration & Repair Laboratory at NEI.

Overview

This resource provides the data and code for single or multiple gene analysis of human and mouse transcriptome and genome data for ocular genes. Additionally, users can search for genetic mutations identified in the Neurobiology Neurodegeneration & Repair Laboratory at NEI.

Resources

transcriptome logo

Transcriptome blue arrow logo

Global RNA landscape associated with ocular development, aging, and disease.
ocular genome logo

How is the next generation sequencing data analyzed? blue arrow logo

The analyzed data is created by taking the raw FASTQ file and processing it through the RNAseq data pipeline

Notes

Improved Retinal Organoid Differentiation by Modulating Signaling Pathways Revealed by Comparative Transcriptome Analyses with Development In Vivo

Any next generation sequencing data that is used must be cited. This includes the BAM and FASTQ files as well as any charts or heatmaps used from the analysis pages. The data must be cited as follows:

  • Published data: Cite the publication listed on the data details page.
  • Unpublished data: Cite Brooks, MJ and Swaroop, A as unpublished data via NEI Commons.

Questions?

Please contact Anand Swaroop at anands@nei.gov with any questions about Next Generation Sequencing (Ocular Genomes).

 

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